Bioinformatics is a multidimensional industry that intersects biology, information technology, and computer science to interpret biological data. Companies in this field utilize tech advancements to analyze and understand complex biological systems, primarily focusing on genomics and molecular biology. Bioinformatics companies in Massachusetts, one of the leading tech and biology hubs, provide services like genomic profiling, genome sequencing, molecular insights, data analysis and more. While providing powerful solutions for health, agriculture, and environment, the industry is poised for exponential growth with the emerging integration of artificial intelligence and machine learning technologies.


Top 23 bioinformatics companies in Massachusetts

1. Foundation Medicine

  • Website: foundationmedicine.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2010
  • Headcount: 1001-5000
  • Latest funding type: Acquired
  • LinkedIn

Foundation Medicine is a world-leading molecular insights company that provides comprehensive genomic profiling services. They offer a range of tests and services for cancer care, including FoundationOne Liquid CDx, an FDA-approved next-generation sequencing test for advanced cancer patients. Their tests analyze genes using circulating cell-free DNA and can identify patients who may benefit from specific therapies. Foundation Medicine is dedicated to treating the whole person and empowering personalized cancer treatment.


2. Broad Institute of MIT and Harvard

  • Website: broadinstitute.org
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2003
  • Headcount: 501-1000
  • Latest funding type: Grant
  • LinkedIn

Broad Institute Genomic Services provides comprehensive services for data analysis and genomic sequencing. They offer services such as whole genome sequencing, whole exome sequencing, and clinical research sequencing. Their goal is to leverage genomic data for the understanding, diagnosis, and treatment of human disease.


3. Azenta Life Sciences

  • Website: azenta.com
  • Headquarters: Chelmsford, Massachusetts, United States
  • Founded: 1978
  • Headcount: 1001-5000
  • Latest funding type: Post Ipo Equity
  • LinkedIn

Azenta.com is a life sciences company specializing in genomics research and analysis. They offer educational articles, symposiums, and tutorials on topics such as single-cell sequencing, RNA-Seq data analysis, and plasmid DNA preparation. Their focus is on understanding human health and disease through PacBio HiFi sequencing and optimizing AAV plasmid preparation. Contact them to learn more.


4. Quantori

  • Website: quantori.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2018
  • Headcount: 501-1000
  • Latest funding type: Seed
  • LinkedIn

Quantori is a company that provides end-to-end solutions for the life sciences and healthcare industries. With over 20 years of experience and superior software engineering skills, they offer services in advanced analytics, bioinformatics, and data sciences. They specialize in leveraging AWS technologies for IT projects and have multiple certifications in that area.


5. nference

  • Website: nference.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2013
  • Headcount: 201-500
  • Latest funding type: Non Equity Assistance
  • LinkedIn

nference.com is a company that creates AI-enabled solutions for healthcare. Their platform leverages advanced analytics to generate, evaluate, and validate novel hypotheses in order to promote new scientific breakthroughs. They specialize in transforming semi-structured and unstructured healthcare data into structured labeled data, resulting in the largest labeled dataset in healthcare. Their products enable rapid synthesis of biomedical information, both publicly available data and information contained in electronic medical records.


6. Seven Bridges

  • Website: sevenbridges.com
  • Headquarters: Boston, Massachusetts, United States
  • Founded: 2009
  • Headcount: 201-500
  • Latest funding type: Series C
  • LinkedIn

Seven Bridges is a bioinformatics company that offers comprehensive solutions to advance genomic research and accelerate the development of new treatments and diagnostics. Their bioinformatic workflows and algorithms streamline clinical trial research and increase speed to market. They provide a platform for organizing and exploring omics data, along with integrated security features. Their customers include biopharma companies, government agencies, and academic institutions.


7. XtalPi Inc.

  • Website: xtalpi.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2014
  • Headcount: 501-1000
  • Latest funding type: Series D
  • LinkedIn

XtalPi is a drug discovery company that combines AI and computational chemistry to revolutionize the classical methods for pharmaceutical innovations. They offer one-stop drug discovery services, including hit identification, lead optimization, and molecule synthesis. Their platform uses AI computation, wet lab experimentation, and medicinal chemistry research experience to produce high-quality pre-clinical candidate molecules. XtalPi aims to improve the speed, scale, novelty, and diversity of drug discovery worldwide.


8. Inari

  • Website: inari.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2016
  • Headcount: 51-200
  • Latest funding type: Series E
  • LinkedIn

Inari is a scientific strategy board specializing in CRISPR system. They unlock the full potential of every seed through their SEEDesign™ platform, which uses predictive design and advanced multiplex gene editing. Their step-change products lead to more productive acres and a more sustainable future for the food system.


9. Gns

GNS Healthcare is a company that specializes in creating accurate digital twins powered by multi-omic and clinical patient data, along with their patented Causal AI and Simulation technology REFS™. Their digital twins enable the simulation of disease progression and drug response at an individual patient level, allowing for precision medicine and personalized treatments.


10. BostonGene

  • Website: bostongene.com
  • Headquarters: Waltham, Massachusetts, United States
  • Founded: 2015
  • Headcount: 51-200
  • Latest funding type: Series B
  • LinkedIn

BostonGene is a company that provides comprehensive molecular and immune profiling for personalized cancer care. They offer innovative clinical solutions in oncology that uncover the unique features of each tumor, enabling doctors to design the best treatment options for patients. With a focus on precision medicine, BostonGene develops and validates new approaches in cancer research and collaborates with leading institutions and organizations in the field.


11. Genuity Science

  • Website: genuitysci.com
  • Headquarters: Boston, Massachusetts, United States
  • Founded: 2013
  • Headcount: 201-500
  • LinkedIn

Genuity Science is a company that specializes in biomarker discovery and offers biological data insights to accelerate precision medicine. They have expertise in massive, population-scale datasets and deep learning methods, enhanced by a data analysis platform built for population-scale genomics.


12. Valo

  • Website: valohealth.com
  • Headquarters: Boston, Massachusetts, United States
  • Founded: 2019
  • Headcount: 51-200
  • Latest funding type: Series C
  • LinkedIn

Valo Health is a company dedicated to advancing the discovery and development of life-changing medicines by harnessing high-quality patient data and powerful AI-driven technology. They have assembled a team of software engineers, data scientists, biologists, medicinal chemists, and big-picture thinkers to accelerate the creation of innovative drugs.


13. LifeMine Therapeutics

  • Website: lifeminetx.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2017
  • Headcount: 51-200
  • Latest funding type: Series C
  • LinkedIn

LifeMine Therapeutics is a biotech company that utilizes genetically-encoded small molecules (GEMs) from the biosphere to discover novel medicines. Their AI- and genomically-enabled drug discovery engine aims to conquer previously unconquerable human diseases.


14. Xbiome

  • Website: xbiome.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2017
  • Headcount: 51-200
  • LinkedIn

Xbiome.com is a leading pharmaceutical company specializing in AI technology for the analysis and optimization of gut microbiome. They offer innovative solutions for personalized medicine and drug development.


15. Diamond Age Data Science

Diamond Age is a data science company that specializes in bioinformatics and computational biology. They partner with biotech and pharmaceutical companies to provide experimental design and data analysis solutions or can tailor bespoke solutions for their biggest challenges.


16. Watershed Informatics

  • Website: watershed.ai
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2020
  • Headcount: 1-10
  • LinkedIn

Watershed.ai offers a cloud-based platform that simplifies data management for biologists and bioinformaticians. It utilizes a toggleable code vs. no-code interface to encourage utility among users with varying degrees of programming experience and enables easy sharing of datasets and results within teams and across institutions.


17. BioTeam, Inc.

  • Website: bioteam.net
  • Headquarters: Middleton, Massachusetts, United States
  • Founded: 2002
  • Headcount: 11-50
  • LinkedIn

BioTeam is a life sciences IT consulting company that helps organizations eliminate data silos and enable collaboration with data lakes and data commons. They specialize in designing technology foundations that fit into existing and future environments, building scientific data ecosystems, and translating scientific needs into scalable and automated IT solutions.


18. ProFound Therapeutics

  • Website: profoundtx.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2022
  • Headcount: 11-50
  • Latest funding type: Series A
  • LinkedIn

ProFound Therapeutics is a pioneering company that is revolutionizing biomedicine. By breaking the bounds of traditional rules, they have discovered an expanded universe of proteins in the human proteome, leading to countless new intervention points across diseases. With this knowledge, they are creating breakthrough medicines with unlimited potential for impact.


19. Bhasin Systems Biomedicine Lab

  • Website: bhasinlab.org
  • Headquarters: Boston, Massachusetts, United States
  • Headcount: 1-10

Tellechea A, Bai S, Dangwal S, Theocharidis G, Nagai M, Koerner S, Cheong JE, Bhasin S, Shih TY, Zheng Y, Zhao W, Zhang C, Li X, Kounas K, Panagiotidou S, Theoharides T, Mooney D, Bhasin M, Sun L, Veves A. Topical Application of a mast cell stabilizer improves impaired diabetic wound Healing. J Invest Dermatol. Skibsted S, Bhasin MK, Henning DJ, Jaminet SC, Lewandowski J, Kirkegaard H, Aird WC, Shapiro NI. Leukocyte Transcriptional Response in Sepsis. Shock. 2019 Aug;52(2):166-173. Panigrahy D, Gartung A, Yang J, Yang H, Gilligan MM, Sulciner ML, Bhasin SS, Bielenberg DR, Chang J, Schmidt BA, Piwowarski J, Fishbein A, Soler-Ferran D, Sparks MA, Staffa SJ, Sukhatme V, Hammock BD, Kieran MW, Huang S, Bhasin M, Serhan CN, Sukhatme VP. Preoperative stimulation of resolution and inflammation blockade eradicates micrometastases. J Clin Invest. 2019 Jun 17;129(7):2964-2979. Mugoni V, Panella R, Cheloni G, Chen M, Pozdnyakova O, Stroopinsky D, Guarnerio J, Monteleone E, Lee JD, Mendez L, Menon AV, Aster JC, Lane AA, Stone RM, Galinsky I, Zamora JC, Lo-Coco F, Bhasin MK, Avigan D, Longo L, Clohessy JG, Pandolfi PP. Vulnerabilities in mIDH2 AML confer sensitivity to APL-like targeted combination therapy. Cell Res.;29(6):446-459 Lynch MR, Tran MT, Ralto KM, Zsengeller ZK, Raman V, Bhasin SS, Sun N, Chen X, Brown D, Rovira II, Taguchi K, Brooks CR, Stillman IE, Bhasin MK, Finkel T, Parikh SM. TFEB-driven lysosomal biogenesis is pivotal for PGC1-dependent renal stress resistance. JCI Insight. 2019 Mar 14;5. Chen CH, Bhasin S, Khanna P, Joshi M, Joslin PM, Saxena R, Amin S, Liu S, Sindhu S, Walker SR, Catalano P, Frank DA, Alper SL, Bhasin M, Bhatt RS. Study of Cathepsin B inhibition in VEGFR TKI treated human renal cell carcinoma xenografts. Oncogenesis. 2019 Feb 22;8(3):15 Khatri I, Ganguly K, Sharma S, Carmicheal J, Kaur S, Batra SK, Bhasin MK. Systems Biology Approach to Identify Novel Genomic Determinants for Pancreatic Cancer Pathogenesis. Sci Rep. 2019 Jan 15;9(1):123. Chang J, Bhasin SS, Bielenberg DR, Sukhatme VP, ...


20. Ramon Diaz-Uriarte

  • Website: ligarto.org
  • Headquarters: Boston, Massachusetts, United States
  • Headcount: 1-10

Ramon Diaz-Uriarte is a company that operates in the Biotechnology industry. It employs 1-5 people and has $1M-$5M of revenue. The company is headquartered in Boston, Massachusetts.


21. Paradigm4

  • Website: paradigm4.com
  • Headquarters: Waltham, Massachusetts, United States
  • Founded: 2009
  • Headcount: 11-50
  • Latest funding type: Series A
  • LinkedIn

Paradigm4 is a company that offers transformative analytics software platform called REVEAL. It specializes in integrative analytics, providing users with easy access to multiple data types. The company's platform is used in various industries, including life sciences.


22. Scipher Medicine

  • Website: sciphermedicine.com
  • Headquarters: Waltham, Massachusetts, United States
  • Founded: 2015
  • Headcount: 51-200
  • Latest funding type: Series D
  • LinkedIn

Scipher Medicine is a company that uses a patient’s individual molecular data to ensure optimal therapy is prescribed from day one, improving lives and saving money.


23. Cellarity

  • Website: cellarity.com
  • Headquarters: Cambridge, Massachusetts, United States
  • Founded: 2017
  • Headcount: 51-200
  • Latest funding type: Series C
  • LinkedIn

Cellarity is a company that specializes in rewriting the rules of drug creation. Their platform provides critical insights into cellular dysfunction and reveals new biology that can be used to treat various diseases. With programs in hematology, immuno-oncology, and metabolism, Cellarity is pioneering a new generation of medicines.


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